Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Viral Transcription (GO:0019083) Genes Targeted by hsa-mir-590-3p in SRS Ovarian Hendrix Cluster 11 Table contains all genes in the SRS Ovarian Hendrix cluster number 11. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-590-3p GO:0019083 51562 MBIP MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:20427] zzz999 5250 SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 [Source:HGNC Symbol;Acc:10989] zzz999 10944 C11orf58 chromosome 11 open reading frame 58 [Source:HGNC Symbol;Acc:16990] P T 9559 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711] T 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 55914 ERBB2IP erbb2 interacting protein [Source:HGNC Symbol;Acc:15842] P T 3796 KIF2A kinesin heavy chain member 2A [Source:HGNC Symbol;Acc:6318] T 7110 TMF1 TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:11870] P T 273 AMPH amphiphysin [Source:HGNC Symbol;Acc:471] zzz999 1105 CHD1 chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:1915] zzz999 54793 KCTD9 potassium channel tetramerisation domain containing 9 [Source:HGNC Symbol;Acc:22401] zzz999 5991 RFX3 regulatory factor X, 3 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9984] T 79934 ADCK4 aarF domain containing kinase 4 [Source:HGNC Symbol;Acc:19041] zzz999 56253 CRTAM cytotoxic and regulatory T cell molecule [Source:HGNC Symbol;Acc:24313] T 102 ADAM10 ADAM metallopeptidase domain 10 [Source:HGNC Symbol;Acc:188] P T 51397 COMMD10 COMM domain containing 10 [Source:HGNC Symbol;Acc:30201] T 10527 IPO7 importin 7 [Source:HGNC Symbol;Acc:9852] zzz999 10671 DCTN6 dynactin 6 [Source:HGNC Symbol;Acc:16964] P T 51108 METTL9 methyltransferase like 9 [Source:HGNC Symbol;Acc:24586] zzz999 6210 RPS15A ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] zzz999 Yes 3741 KCNA5 potassium voltage-gated channel, shaker-related subfamily, member 5 [Source:HGNC Symbol;Acc:6224] zzz999 411 ARSB arylsulfatase B [Source:HGNC Symbol;Acc:714] P T 81537 SGPP1 sphingosine-1-phosphate phosphatase 1 [Source:HGNC Symbol;Acc:17720] T 689 BTF3 basic transcription factor 3 [Source:HGNC Symbol;Acc:1125] zzz999 1022 CDK7 cyclin-dependent kinase 7 [Source:HGNC Symbol;Acc:1778] T Yes 26038 CHD5 chromodomain helicase DNA binding protein 5 [Source:HGNC Symbol;Acc:16816] zzz999 6189 RPS3A ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] zzz999 Yes 57763 ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 [Source:HGNC Symbol;Acc:13208] P T 466 ATF1 activating transcription factor 1 [Source:HGNC Symbol;Acc:783] P T 4524 MTHFR methylenetetrahydrofolate reductase (NAD(P)H) [Source:HGNC Symbol;Acc:7436] T 6130 RPL7A ribosomal protein L7a [Source:HGNC Symbol;Acc:10364] zzz999 Yes 9867 PJA2 praja ring finger 2 [Source:HGNC Symbol;Acc:17481] P T 336 APOA2 apolipoprotein A-II [Source:HGNC Symbol;Acc:601] zzz999 902 CCNH cyclin H [Source:HGNC Symbol;Acc:1594] zzz999 Yes 55164 SHQ1 SHQ1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25543] zzz999 3603 IL16 interleukin 16 (lymphocyte chemoattractant factor) [Source:HGNC Symbol;Acc:5980] T 56124 PCDHB12 protocadherin beta 12 [Source:HGNC Symbol;Acc:8683] zzz999 6401 SELE selectin E [Source:HGNC Symbol;Acc:10718] zzz999 6228 RPS23 ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] T Yes 27292 DIMT1L DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30217] zzz999 51320 MEX3C mex-3 homolog C (C. elegans) [Source:HGNC Symbol;Acc:28040] P T 27158 NDOR1 NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:29838] zzz999 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] P T 7518 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:HGNC Symbol;Acc:12831] P T 26091 HERC4 hect domain and RLD 4 [Source:HGNC Symbol;Acc:24521] T 9522 zzz999 zzz999 T 23107 MRPS27 mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:14512] T 4023 LPL lipoprotein lipase [Source:HGNC Symbol;Acc:6677] T 83989 FAM172A family with sequence similarity 172, member A [Source:HGNC Symbol;Acc:25365] T 9023 CH25H cholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:1907] zzz999 185 AGTR1 angiotensin II receptor, type 1 [Source:HGNC Symbol;Acc:336] zzz999 80224 NUBPL nucleotide binding protein-like [Source:HGNC Symbol;Acc:20278] T 64398 MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) [Source:HGNC Symbol;Acc:18669] P T 8516 ITGA8 integrin, alpha 8 [Source:HGNC Symbol;Acc:6144] zzz999 5193 PEX12 peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:8854] zzz999 10398 MYL9 myosin, light chain 9, regulatory [Source:HGNC Symbol;Acc:15754] zzz999 10294 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:HGNC Symbol;Acc:14884] P T 124152 IQCK IQ motif containing K [Source:HGNC Symbol;Acc:28556] zzz999 2660 MSTN myostatin [Source:HGNC Symbol;Acc:4223] P T 5959 RDH5 retinol dehydrogenase 5 (11-cis/9-cis) [Source:HGNC Symbol;Acc:9940] zzz999 9782 MATR3 matrin 3 [Source:HGNC Symbol;Acc:6912] zzz999 8546 AP3B1 adaptor-related protein complex 3, beta 1 subunit [Source:HGNC Symbol;Acc:566] T 1161 ERCC8 excision repair cross-complementing rodent repair deficiency, complementation group 8 [Source:HGNC Symbol;Acc:3439] T 92342 METTL18 methyltransferase like 18 [Source:HGNC Symbol;Acc:28793] zzz999 3998 LMAN1 lectin, mannose-binding, 1 [Source:HGNC Symbol;Acc:6631] T 6884 TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa [Source:HGNC Symbol;Acc:11546] T 6418 SET SET nuclear oncogene [Source:HGNC Symbol;Acc:10760] T 55713 ZNF334 zinc finger protein 334 [Source:HGNC Symbol;Acc:15806] zzz999 6902 TBCA tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579] P T 2737 GLI3 GLI family zinc finger 3 [Source:HGNC Symbol;Acc:4319] T

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